.jar files: The .jar files contain libraries, resources and accessories files like property files.
.war files: The war file contains the web application that can be deployed on any servlet/jsp container. The .war file contains jsp, html, javascript and other files necessary for the development of web applications.
More info is at the links:
http://stackoverflow.com/questions/5871053/java-war-vs-jar-what-is-the-differencehttp://www.java-tips.org/java-ee-tips/enterprise-java-beans/difference-between-ear-jar-and-war.html
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